The prosperity of rural industries is an important step for rural revitalization, whose aim is to improve farmers’ income and increase agricultural efficiency. under
this background, the existing indicators to evaluate agricultural modernization process have been covering a wide range. The paper puts forward a evaluation indicators system, including a rule layer with 3 factors and an index layer with 8 defined indexes. The results with the number of comprehensive evaluation method show that Fujian’s overall agricultural modernization process is still at an initial stage; there are various weak links in the process of agricultural modernization across Fujian. So it needs to improve weak links in agricultural inputs; move characteristic modern agriculture industrialization forward by the way of whole industry chain; increase the cooperation in agricultural fields inside and outside Fujian province and promote fusion development.